Tomographic reconstruction at BEATS

This section contains examples of tomographic reconstruction pipelines using TomoPy.

Note

Reconstruction pipelines at BEATS can be also executed from the command line, or as Slurm jobs on rum@sesame.org.jo. The header of each example shows the shell command to launch the pipeline as a script. Visit the page BEATS Computing Infrastructure for more information.

• BEATS CT reconstruction pipeline
• BEATS CT reconstruction pipeline - Paganin phase retrieval
• Inspect 3D dataset with napari
• Read theta array from encoder readout
• Convert 360-degrees extended Field Of View scan to standard 180-degree